Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQRKAVLVMGAGDATGGAIARRFAREGYVACVARRNAEKLEPLVQAIRDQGGEALACGCDARQEQQVIDLFARIEGEVGALEAVIFNVGANVW-FPITETTERVYRKVWEMAAFGGFLTGREAARVMLPRQRGTIIFTGATASLRGRAHFAAFSGAKFALRALAQSMARELGPKDIHVAHPIIDGAIDTDFIRETLPELY------KRKEQDGILDPEHIAETYWQIHCQPRDCWVHELDLRPWMETF
2ZAT Chain:A ((12-256))
-LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLA-PGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCS-EDASYITGETVVVGGGTA
General information:
TITO was launched using:
RESULT:
Template:
2ZAT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142660 for 2079 contacts (-68.6/contact) +
2D Compatibility (PS) -25482 + (NN) -12372 + (LL) 532
1D Compatibility (HY) -6800 + (ID) 2500
Total energy: -189282.0 ( -91.04 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_2ZAT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZAT-query.scw
PDB file :
Tito_Scwrl_2ZAT.pdb
: