Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTV-------VSFRADDALVAALDELARATHRDRPYHLRQALAQYLERQQWQVAAIDEGL-ADANAGRLLEHIEIEKRWGLQ
2K5J Chain:A ((1-80))
MNSLAGIDMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPGIWQGCEEDGVEYQRKLREEW---
General information:
TITO was launched using:
RESULT:
Template:
2K5J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8124 for 262 contacts (-31.0/contact) +
2D Compatibility (PS) -7519 + (NN) -1387 + (LL) 124
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -21606.0 ( -82.47 by residue)
QMean score : 0.231
(partial model without unconserved sides chains):
PDB file :
Tito_2K5J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5J-query.scw
PDB file :
Tito_Scwrl_2K5J.pdb
: