Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRAARPCNRFCSLLLGLALLMPASLPLSAAETVAPPSPRTLIIDTDPGADDVIALLFAMASPKELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAADVHGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAK-LRNLGNQAGKTVADILDAYVQYDIKYYGLKGGPVHDATVV------AYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIARLP |
| 3T8I Chain:C ((2-306)) | ---------------------------------------RKVIVDSDTATDDTIAILLA---SRFFQLLGVTIVAGNVNYNQEVKNALFTLEYIGKQDVPVYLGSQRPILGNWRTVEEVHGSNGMSNWNYPEPNKRPEKEHAIDAILR-LSKEHEGELEILAISPLTNIALAYLKDPSVVKRVKKIWIMGGA-FSKGNTTPIAEFNFWVDPEAAKIVLDAGFDITIVPWEVAEISGSLNERDWEYISKLNTKLSNFFINVNKTLKEYTTKNQGISGSIHPDSLTVSIAHDNSIILDSSL---KYVDVELCSK---SRGAMLIDWYSLHKNKPNAEIVLKADGGKFKNLLFNSLSQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T8I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136566 for 2731 contacts (-50.0/contact) +
2D Compatibility (PS) -32763 + (NN) -18369 + (LL) 3108
1D Compatibility (HY) -22400 + (ID) 5150
Total energy: -212140.0 ( -77.68 by residue)
QMean score : 0.444
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