Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADALDSLRLMRTQERPAQVFVRGQGSWLWDSDGRAFLDFTQGLAVNCLGHSPSVLVQALARQARELVSAGPGLLNRPVLALAQRLCLAT--GSDQAYFLTSGAEANEAAIALARKWGRLHRGGAQRIVSTVNSIHGRTPGTLTACGKPAQHGLEGFARV-------PFN---------------DLDAMAAAIDEET----VAVMLEPVQGDAGVIPATLDYLRGIERLCRQRGVLLILDEVQTGIGRCGALLAEELYGVRADIVTLGKGLGAGVPLSALLARGNACCFEPGDQLG-----THHGNALMTAAGLAVLNTVLEPGFLEQVREQGTHLRDGLARVARRYG-HGPLRGQGLFWGLPLIGQR---APA------VVRAAFGEGLLINAPQ----PHCLRFSPALTVSRANVDEMLRRLERALARVANRHEEVA |
| 1DGE Chain:A ((26-430)) | ------------------MIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSGMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVT-----GKYEIVGFAQSWHGMTGAAASATYSAGRKGV-GPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAGLPLAAIVT--SAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERAL------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DGE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -211512 for 3077 contacts (-68.7/contact) +
2D Compatibility (PS) -39406 + (NN) -19168 + (LL) 2520
1D Compatibility (HY) -26000 + (ID) 7100
Total energy: -300666.0 ( -97.71 by residue)
QMean score : 0.459
|
|
|