Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRAVVELLAGARRLVIFTGAGVSAESGIPTFRDALGGLWARYDPAALATPAAFADDPALVWGWYEWRRLKVLGVQPNPAHRAIAALSGRIA----NTRLVTQNVDDLHERAGSRDVLHLHGSLHAPRCATCA---AAYRDAL---------PDSVEPEEGRRIE-PPRC--PACGGQVRPGVVWFGEALPEAALREAFAAACECDLLLSVGTSGVVQPAARIPGLALEHGASVVHVNPQPVRTRHPREHCLVGPAGEVLPELLRRAFPG
4UU7 Chain:A ((13-274))
LTAFREHFAKAKHIAIITGAGVSAESGVPTFRGP-GGFWRKWQAQDLATPEAFSRDPSLVWEFYHYRREVMRSKMPNPAHLAIAECEARLGQQGRSVVIITQNIDELHHRAGSKHVYEIHGSLFKTRCMSCGEVKANHKSPICPALDGKGAPDPNTKEARIPVELLPRCERKSCNGLLRPHVVWFGETLDSDILTAVERELEKCDLCLVVGTSSIVYPAAMFAPQVASRGVPVAEFNMECTPATQ--KYHFEGPCGSTLPPALE-----
General information:
TITO was launched using:
RESULT:
Template:
4UU7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136513 for 1911 contacts (-71.4/contact) +
2D Compatibility (PS) -26246 + (NN) -16819 + (LL) 472
1D Compatibility (HY) -16000 + (ID) 5200
Total energy: -200306.0 ( -104.82 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_4UU7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UU7-query.scw
PDB file :
Tito_Scwrl_4UU7.pdb
: