Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTCAYRREIHHAHVAIRDWL-AGDSRADALDALMARFAEDFS-MVTPH----GVVLDKTALGELFRSKGGTRPGLRIEIDGESLLASGVDGATLAYREIQSDA---------AGRSERLSTVVLHRDDEGRLYWRHLQETFCG
3F9S Chain:A ((7-124))
----------KAKEILTQFTREVWSE-GNIEASDKYIAPKYTVLHDPGDPWEGRELDVAGYKERVKTLRAAFPDQCFDIQGLF---ADGDAVVMTWLWTATHKEDIPGFPSTGKQIKMSGATVYYFD-GNRLTGHWQITDRLG
General information:
TITO was launched using:
RESULT:
Template:
3F9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16285 for 665 contacts (-24.5/contact) +
2D Compatibility (PS) -10715 + (NN) -2632 + (LL) 1668
1D Compatibility (HY) -800 + (ID) 850
Total energy: -29614.0 ( -44.53 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_3F9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F9S-query.scw
PDB file :
Tito_Scwrl_3F9S.pdb
: