Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MSRIDT--PPGFAVYPSASPKAANLPAVDQVLAFEQALGGEPPAAGRRLAGLENGALGERLLQRFAQPLQGLEADRLELKAMLRAELPLGRQQQ-TFLLQ-------------LLGAVEHAPGGE------YLAQLARRELQVLIPLNGMLDNLVRNSHKLDLES------------------------- |
| 4QDJ Chain:A ((2-230)) | TNAALDDKTIVRDYFNSTGFDRWRRIYGDGQVNFVQKDIRVGHQQTVDSVVAWLVADGN-LPGLLVCDAGCGVGSLSIPLAQAGALVYGSDISEKMVGEAQQKAQEVLAYGNQPTFMTQDLAQLGGKYDTVICLDVLIHYPTEEASAMISHLASLADRRLILSFAPKRAYQHKEADIRKILGDNGFSIARTGMTSTRFYYSRILEAVRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5098 for 946 contacts (-5.4/contact) +
2D Compatibility (PS) -15291 + (NN) -7030 + (LL) 104
1D Compatibility (HY) -2000 + (ID) 1700
Total energy: -31015.0 ( -32.79 by residue)
QMean score : 0.167
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