Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQHKR-SRAMASPRSPFLFVLLALAVGGTANAHDDGLPAFRYS-----AELLGQLQLPSVALP---LNDDLF-----LYGRDAEAFDLEAYLALNAPALRDKSEYLEHWSGYY-------SINPKVLLTLMVMQSGPLGAPDERALAAPLGRLSAKRGFDAQVRDVLQQL-SRRYYGFEEYQLRQAAARKAVGEDGLNAASAALLGLLREGAKVSAVQGGNPLGAYAQTFQRLFGTPAAELLQPSNRVARQLQAKAALAPPSNLMQLPWRQGYSWQPNGAHSNTGSGYPYSSFDASYDWPRWG-SATYSVVAAHAGT----VRVLSRCQ-VRVTHPSGWATNYYHMDQIQVSNGQQVSADTKLGVYAGNIN--TALCEGGSSTGPHLHFSLLYNG---AFVSLQGASFGPYRINVGTSNYDNDCRRYYFYNQSAGTTHCAFR--PLYNPGLAL---- |
| 4Q6O Chain:A ((21-437)) | MIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEV-------------KGAKFPNLLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDTE-------------MQKALTFYAINQKK----------SAFANEASKELPLASRVFYHLQAIEGLL---NQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFS-GMILVKFV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89935 for 3038 contacts (-29.6/contact) +
2D Compatibility (PS) -39772 + (NN) -4755 + (LL) 1404
1D Compatibility (HY) -12800 + (ID) 3350
Total energy: -149208.0 ( -49.11 by residue)
QMean score : 0.053
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