Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLTLRPAGVDDLSALVELENRCFDY--------DRLSRRNFQWMLTRAHASLTVAEGDGGVLGYALVLFHEGTSLARLYSIAIDPRARGIGLGQKLLEAAEQAARDND-RAYMRLEVRPDNRGAIALYERNGYRPFATVRDYYED--HSEALRFEKRIRNPGHDQRRHVPFYRQTTDFTCGPACLLMAMGALQPERQLTRREELRLWREATTIYMTAGHGGCSPQGLALAAWRRGFRVKLVLSAGGPLFLDGVRNEDKKAVMRLVHEDFCEELDASGVEQKRSARLDIPRQLARGGQPLVLISSYRLTRSKAPHWVLVTHYDEDFVYLHDPDVDHSQHRQPLDCQHIPVSHAEFDKMSRFGRSKLRAAVILFNPE |
| 3KKW Chain:A ((23-181)) | MQLSHRPAETGDLETVAGFPQDRDELFYCYPKAIWPFSVAQLAAAIAER-RGSTVAVHDGQVLGFANFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHDPDGRRVALIQMDKPLE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53767 for 1098 contacts (-49.0/contact) +
2D Compatibility (PS) -16119 + (NN) -7910 + (LL) 14116
1D Compatibility (HY) -7600 + (ID) 1850
Total energy: -73130.0 ( -66.60 by residue)
QMean score : 0.441
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