Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHPTPRLAAALLAGSGLGWPLLAQADLVEDSHASLELRNFYFNRDFRQSGARDNADEWAQGFLLRLESGFSEGTVGFGVDAIGLLGFKLDSGSGSGGTGLLPADGSAGGSQDDYAKLG-LTAKARVSNSLLKVGALHFKSPLVSANDTRLLPELFRGALLDVQEIDGLTLRGAHLDRNKLNSSSDYQVFSANR-IGGRSDAFDFAGGDYRLT-PALTASLHQGRLKDIYRQTFAGLVHTLDLGGQRSLKSDLRFARASEDGGF--RELDNRAFGALFSLRLGAHAVAAGYQRISGDDPYPYIAGS-DPYLVNFIQIGDFGNVDERSWQLRYDYDFGALGLPGLSFMSRYVSGDNVARGAANDGKEWERNTDLGYVVQSGPLKNLGVKWRNATVRSNFANDLDENRLILSYSLALW |
| 2Y2X Chain:A ((4-390)) | -------------------------GFLEDAKTDLVLRNYYFNRDF-------LVDEWAQGFILKFSSGYTPGTVGVGLDAIGLFGVKLNS-----NSELLPLH-DDGRAADNYGRVGVA-AKLRVSASELKIGEMLPDIPLLRYDDGRLLPQTFRGFAVVSRELPGLALQAGRFDAVSLRNSADMQDLSAWSAPTQKSDGFNYAGAEYRFNRERTQLGLWHGQLEDVYRQSYANLLHKQRVGD-WTLGANLGLFVDRDDGAARAGEIDSHTVYGLFSAGIGLHTFYLGLQKVGGDSGWQSVYGSSGRSMGNDMFNGNFTNADERSWQVRYDYDFVGLGWPGLIGMVRYGHGSNATTKAGSGGKEWERDVELGYTVQSGPLARLNVRLNHASNRRSFNSDFDQTRLVVSYPLSW- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15944 for 2923 contacts (-5.5/contact) +
2D Compatibility (PS) -37541 + (NN) -2739 + (LL) 1408
1D Compatibility (HY) -29600 + (ID) 8100
Total energy: -92516.0 ( -31.65 by residue)
QMean score : 0.195
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