Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDLRDP---QLKAAMLEQSRDCAAAADELERIVLELGGKPKDSTSFAGDLHRRWVDLKSLVTGKDEEAVLNECERGEDVAKHRYQAALEKSLP---AEIHQVIERQYQGVLRHHDRVRALRDARA---------------
1BCF Chain:A ((1-157))
--MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQ------------DLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREE
General information:
TITO was launched using:
RESULT:
Template:
1BCF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2646 for 988 contacts (-2.7/contact) +
2D Compatibility (PS) -15552 + (NN) -12768 + (LL) 948
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -35318.0 ( -35.75 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_1BCF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BCF-query.scw
PDB file :
Tito_Scwrl_1BCF.pdb
: