Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERKRWLAGCLSALLSLPLAAAVPGPDAPADLARGKAMAQKMCSRCHDDDGNGGPRPNRSYPKLAGLDREY--L-YKQIYDLKTQRRRNPATNGRGEELSAADVVNVSAWFAAQRMSAGEQTLADPRQRERGRQLFENGLAQRGVPPCVTCHGPAAQGLAALKAPRLAGQW---AEYLATQL-HGFRDGKRGNSATMRAVAGGLEDSHIQALAGYLGSLGP
3MK7 Chain:C ((129-302))
-----------------------------PQAVKMGARLFANYCSICHGSDAKGS----LGFPNLADQDWRWGGDAASIKTSILNGRI--AAMPAWGQAIGEEGVKNVAAFVRKDLAGLPLP-EGTDADLSAGKNVYA--------QTCAVCHGQGGEGMAALGAPKLNSAAGWIYGSSLGQLQQTIRHG---RNGQMPAQQQYLGDDKVHLLAAYVYSLS-
General information:
TITO was launched using:
RESULT:
Template:
3MK7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19172 for 1218 contacts (-15.7/contact) +
2D Compatibility (PS) -17474 + (NN) -9373 + (LL) 2028
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -52991.0 ( -43.51 by residue)
QMean score : 0.303
(partial model without unconserved sides chains):
PDB file :
Tito_3MK7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MK7-query.scw
PDB file :
Tito_Scwrl_3MK7.pdb
: