Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTYFDIPHRLVGKALYESYYDHFGQMDILSDGSLYLIYRRATEHVGGSDGRVVFSKLEGGIWSAPTIVAQAGGQDFRDVAGGTMPSGRIVAASTVYE-----TGEVKVYVSDDSGVTWVHKFTLARGGA--DY-N-----FAHGKSFQV-GARYVIPLYAATG--VNYELKWLESSDGGETWGEGSTIYSGN--------TPYNETSYLPVGDGVILAVARVGSGA--GGALRQFISLDDGGTWTDQGNVT-AQ--NGDS--TDILVAPSLSYIYSEGGTPHVVLLYTNRTT-----HFCYYRTILLAKAVAGSSGWTERVPVYSA-P-A--ASGYTSQVVL----GGRRILGNLFRETSSTTSGAYQFEVYLGGVPDFE-SDWFSVSSNSLYTLSHGLQRSP---RRVVVEFARSSSPSTWNIVMPSYFNDGGHKGSGAQVEVGSLNIRLGTGAAVWGTGYFGGIDNSATTRFATGYYRVRAWI |
| 3A72 Chain:A ((22-351)) | ---------------------------------------------------------------------------RTLYPRNEQLPNGDLLA-TWENYSPEPPAVYFPIYRSKDHGKTWNEISRVHDTVNGYGLRYQPFLYSLPERVGSFKKGTLLLAGSSIPTDLSSTDIVLYASQDDGMTWDFVSHIAAGGEARPNNGLTPVWEPFL-LANKGKLICYYSDQRDNATYGQTMVHQVTNDLKNWGPVVEDVTYPTYTDRPGMPVVTKLPNG----------QYFYVYEYGSFFGTETYSFPLYYRLSSD---P-ENIASAPGQRLVVSSGTQPTSSPYAVWTPYGGENGTIIVSSGT----------QGTLFINK--ALGEGEWTEIPCPEEHGYTRALRVLSEDGGRYLVVNSAGVLLGENNRVSVSVMDL----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98478 for 2344 contacts (-42.0/contact) +
2D Compatibility (PS) -32025 + (NN) -20203 + (LL) 7260
1D Compatibility (HY) -2800 + (ID) 1850
Total energy: -148096.0 ( -63.18 by residue)
QMean score : 0.378
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