Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNVRAYQDRGLLPPPERRGRVGVYFDSHLKRLRLISQLLERGYSSANIKELLEAWEQGRDLDHVLGLDQAIIGEWNLETPGSIGFDELQAIFGDELNDRVIDKAQALGLLLFDG----ER---MKIPSPRLFQAGLELYRSGIPLEALLDQLGELRSDTEHLAAGIVRLIVTHLVDGRGTDLLPGAPDLQELAKVFLRLRPLAEHVVQVELARGLKLSANEMLGERVGEMLRKLEKPS |
| 1R8E Chain:A ((4-74)) | ---------------------------------------------------------------------------------SYYSIGEVSKLANV--SIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQD------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R8E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29900 for 389 contacts (-76.9/contact) +
2D Compatibility (PS) -7322 + (NN) -3766 + (LL) 12416
1D Compatibility (HY) -800 + (ID) 350
Total energy: -29722.0 ( -76.41 by residue)
QMean score : 0.628
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