Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTAKPEIVITYCTQCQWLLRAAWLAQELLSTFADDLGKVCLEPGTGGVFRITCDGVQVWERKADGGFPEAKALKQRVRDRIDPQRDLGHNDRPSR
5A6W Chain:A ((4-75))
---LKQKIVIKVAMENNCRSKAMALVAS-----TGGVDSVALVGDLRDKIEVVGYGI------------DPIKLISALRKKVGDAELLQVS-----
General information:
TITO was launched using:
RESULT:
Template:
5A6W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45120 for 498 contacts (-90.6/contact) +
2D Compatibility (PS) -8194 + (NN) -7411 + (LL) 1036
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -63489.0 ( -127.49 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_5A6W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5A6W-query.scw
PDB file :
Tito_Scwrl_5A6W.pdb
: