Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSHQERPLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSHTRKAVMPVVERADALLCYPTPYEGF-----EYSPNIVYGGPAPNQNSAPLAAYLIRHYGERVVFIGSDYIYPRESNHVMRHLYRQHGGTVLEEIYIPLYPSDDDVQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLTTSEAEVAKMESDVAEGQVVVAPYFSS-ID-------TAASRAFVQACHGFFPENATITAWAEAAYWQTLLLGRAAQAAG-------SWRVEDVQRHLYDI-CIDAPQGPVRVERQNNHSR--LSSRIAEIDARGVFQVRWQSPEPIRPDPYVVVHNLDDWSASMGGGALP |
| 3SG0 Chain:A ((25-385)) | ----QAEIKIGITMSASGPGAALGQPQSKTVAALPKEIG------GEKVTYFALDDESDPTKAAQNARKLLSEEKVDVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDIMAEAIGKYIAKTGAKKVGYIGFSDAYGEGYYKVLAAAAPKLGFELTTHEVYARSD--ASVTGQVLKIIATKPDAVFIASAGTPAVLPQKALRERGFKG--AIYQTHGVATEEFIKLGGKDVEGAIFAGEAFSGAEDMPADSPFRKVKARFVDAYKAANGGA-APTIFGVHLWDSMTLVENAIPAALKAAKPGTPEFRAAIRDQIEKSKDLALNNGLSNMTPDNHNGYDERSAFLIEIR-DGAFRLK------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203774 for 3147 contacts (-64.8/contact) +
2D Compatibility (PS) -36788 + (NN) -18853 + (LL) 1108
1D Compatibility (HY) -3600 + (ID) 2950
Total energy: -264857.0 ( -84.16 by residue)
QMean score : 0.645
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