Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSFHIPNMTCGGCAKTVTRILHGVDPQARVETDPPRREARVEST---LDKHAFLEALSEAGYPEGR
1OSD Chain:A ((5-69))
-VTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSS-
General information:
TITO was launched using:
RESULT:
Template:
1OSD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28286 for 455 contacts (-62.2/contact) +
2D Compatibility (PS) -6960 + (NN) -7013 + (LL) 308
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -46401.0 ( -101.98 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_1OSD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OSD-query.scw
PDB file :
Tito_Scwrl_1OSD.pdb
: