Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKDA----GVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS
4QBF Chain:A ((1-186))
MNIVLMGLPGAGKGTQAERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVRERLSKSDCERGFLLDGFPRTVAQAEALEELLEEMGRPIDYVINIQVDKEELIARLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVTKRLEVNMKQTAPLLAFY---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4QBF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59029 for 1333 contacts (-44.3/contact) +
2D Compatibility (PS) -20195 + (NN) -10417 + (LL) 2316
1D Compatibility (HY) -16000 + (ID) 4900
Total energy: -108225.0 ( -81.19 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_4QBF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QBF-query.scw
PDB file :
Tito_Scwrl_4QBF.pdb
: