Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIEKHNIKLATFIAALFYDLSTQKQVRIPTQIEKRDRELYELVKKSKRPVALLVDETHDLNGHTLTGLKRLLELAEDDSGRRRLSIVLAGHPKLCNDLRRPTMEEIGYRTDIFELQEKMQSAGLPV
1SXJ Chain:E ((134-195))
------------------------------------------------RYKCVIINEANSLTKDAQAALRRTMEKYS---K--NIRLIMVCDS--MSPI----IAPIKSQCLLIRCPAPSD------
General information:
TITO was launched using:
RESULT:
Template:
1SXJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29824 for 328 contacts (-90.9/contact) +
2D Compatibility (PS) -6507 + (NN) -972 + (LL) 5356
1D Compatibility (HY) -4400 + (ID) 350
Total energy: -36697.0 ( -111.88 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_1SXJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SXJ-query.scw
PDB file :
Tito_Scwrl_1SXJ.pdb
: