Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLLVLFCCLWLLPGVASAAPS----VGEIRVVSETWTRYTQEDGRGV--AWDLLRAVYEPAGVRLRIANE----PYTRAVGLVLRGEADAWVGAYRGEIDEALYPRWPYDVDPIAVLSLKDNPPPPLEGLSRFRLSWMR--------------GYAFARY---FPTLTPHSELQRRTSALPMLLNHRVDYFIDSRPELEEM------LAGAGALAAEYRITD---------VTRLPLYLGFSD--SPRGRELLALFDRRMRQLHASGELERIFARWNWPYAPLKAILPPKE----------- |
| 4IIK Chain:A ((1-314)) | MRSIITQICNGVLHGQSYQSGSNDLDKGNSEIFASSLFVHLNEQGKEIKDSDDKIVIGYTKDGMAFQIVVDGFYGCERQAVFSFIDNYVLPLIDNFSLDLTRYPDSKKVTESLIHTIYSLRSKHAPLAEFTMSLCVTYQKDEQLFCAGFGIGDTGIAIKRNEGTIEQLVCHTEVDGFKDAFDNYSSANIDLVIERNSVFNTKVMPGDELVGYTYVPPMLEMTEKEFEVEKRIVRHLNLDPGNFDDKDPLFSQLLQVVKSKQKQLVEQAKETGQIQRFGDDFTVGRLVIPDQLLINQLRIHALS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -78123 for 1887 contacts (-41.4/contact) +
2D Compatibility (PS) -25566 + (NN) 1367 + (LL) 0
1D Compatibility (HY) -9200 + (ID) 2150
Total energy: -113672.0 ( -60.24 by residue)
QMean score : 0.169
|
|
|