Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQPQAFYRVVAEDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKGDDLCLLAATIEFLHTSTLLHDDV--VDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMMVELGSMPVMRI-----ISQATRVIAEGEVL--QLSKVRDASTTEETYMEVIR---GKTAMLFEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVTMRDGTEEQAALVRKAIQQGGSQDLESVCAAVEAAGALDYTANLARDYAARAIACLDTLPDNEYRSALVELSEFAVARTH |
4LLT Chain:B ((49-265)) | ----------------------------LPIVEAMAH--ATSGGKRLRGFLVLETARLHDIAAGEAIWSATAIEALHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASASAEVRADLALSLARASGAQGMVLGQALDIAAETARAPLSLDEITRLQQGKTGALIGWSAQAGARLAQA---DTAALKRYAQALGLAFQIADDILDVTGDSAQVGKAVGKDASAGKATF------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -54655 for 1590 contacts (-34.4/contact) +
2D Compatibility (PS) -21941 + (NN) -9240 + (LL) 9968
1D Compatibility (HY) -9200 + (ID) 3850
Total energy: -88918.0 ( -55.92 by residue)
QMean score : 0.351
|
|
|