Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSPHLERGGLPIREVTRLTGVHPVTLRAWERRYGLVVPQ-RTGKGHRLYSEEQVERIRRILVWLERGVAISQVRALLERPEETPAADVESPWERLHEQLLDAIAALAERRLDDLFNQAASLYPVATLCEKLLQPLLQHLERRWQGQFGARMERAFFFSWLRSKLGARLYHQQRLQQGAPLLLVNQSELSLEPNLWLCSWLLGSGEVPLQVFDWPLPPAELALACERLEARGVLLYASHRLNPEHLPRLLAGVSCPVVLVGPAVEIQREAFETLALTGLLLASTPLEARRLLGERGLLNP |
1R8D Chain:A ((2-73)) | ---------KYQVKQVAEISGVSIRTLHHYDNI-ELLNPSALTDAGYRLYSDADLERLQQILFFKEIGFRLDEIKEMLDHPN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43973 for 456 contacts (-96.4/contact) +
2D Compatibility (PS) -8031 + (NN) -5291 + (LL) 17952
1D Compatibility (HY) -7600 + (ID) 1050
Total energy: -47993.0 ( -105.25 by residue)
QMean score : 0.771
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