Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISLERKGHAPTLLYERGIAERFREAIIRRYFS-RGYLLDPFCLAVEEGLPEGFYTLGEIAPD--DFFQSAYYQTYYLGAGAVEDVYYILDLGPTEKLSICLYNGLSASRYSDAQVAALAGLA--PPVLELARQFCAGRADLSPNPQADLAPRLQEVLRGFGRGVLTDREREACHLLLSGHSAKSSARLMDISPETVRMHRKNLYTKLEVGSQSELFALFIECLSQGQRVGP |
1L3L Chain:A ((54-234)) | -----------------------HRQWQSTYFDKKFEALDPVVKRARSRKHIFT--WSGEHERPTLSKDERAFYDHASDFGIRSGITIPIKTANGFMSMFTMASDKPVIDL-DREIDAVAAAATIGQIHAR---ISFLRT----------------TPTAEDAAWLDPKEATYLRWIAVGKTMEEIADVEGVKYNSVRVKLREAMKRFDVRSKAHLTALAIRRKLI------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77385 for 1150 contacts (-67.3/contact) +
2D Compatibility (PS) -18887 + (NN) -8770 + (LL) 2904
1D Compatibility (HY) 1200 + (ID) 1150
Total energy: -102088.0 ( -88.77 by residue)
QMean score : 0.344
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