Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRD-QGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYGR--SEERLGPLLR--GQREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR--EGDCAMVTYNLNERA-ERPVIEYAAAHAKGILVKKALASGHACL-----------------------------------------GAGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAAQALKKA |
1PZ1 Chain:A ((1-301)) | ------MEY-TSIADTGIEASRIGLGTWAIGGTMWG--------GTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLV---PIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQKPRFKEYLSAVNQLDKLAKTRYGKSVIHLAVRWILDQPGADIALWGARKPGQLEALSEITGWTLNSE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95099 for 1930 contacts (-49.3/contact) +
2D Compatibility (PS) -27564 + (NN) -12640 + (LL) 1204
1D Compatibility (HY) -9600 + (ID) 3750
Total energy: -147449.0 ( -76.40 by residue)
QMean score : 0.529
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