Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNLILVGPMGAGKSTIGRLLAKELHLAFKDSDKEIEQRCGANIPWIFDVEGEVGFREREQAMLTELCAADG-MVIATGGGAVMRDGNRQVLRAGGRVVYLHASVEHQIAR-TARDR-NRPLLQKPNPGQILRDLMALRDPLYREIADVVVETDERPPRLVVQEILERLRKLPPR
3MUF Chain:A ((8-151))
-QHLVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTLKTPHVISTGGGIVMHEN----LKGLGTTFYLKMDFETLIKRLNQKEREKRPLLNNLTQA---KELFEKRQALYEKNASFIID-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3MUF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53082 for 1039 contacts (-51.1/contact) +
2D Compatibility (PS) -14793 + (NN) 715 + (LL) 2744
1D Compatibility (HY) -11200 + (ID) 2500
Total energy: -78116.0 ( -75.18 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_3MUF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MUF-query.scw
PDB file :
Tito_Scwrl_3MUF.pdb
: