Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRILLLGANGQVGWELQRALAPLGELLV-CDRRRADLADPEGLARLVRAERPQFIVNAGAYTAVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSVPFAEDAPTGPLSVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGAPTSAELIADVTAQALQRLCWDVELAARASGTYHLVASGETSWHLYARFVIEQALERGWELQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVL-PDWRYHAGRMIQELSEQGPL |
3SC6 Chain:A ((5-285)) | KERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHT---------SLYGTYHVSNTGSCSWFEFAKKIFSY-------ANMKV-NVLPVSTEEFGAAAARPKYSIFQ-HNMLRLNGFLQMPSWEEGLERFFIETK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120505 for 2413 contacts (-49.9/contact) +
2D Compatibility (PS) -30238 + (NN) -13416 + (LL) 1812
1D Compatibility (HY) -19600 + (ID) 4750
Total energy: -186697.0 ( -77.37 by residue)
QMean score : 0.615
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