Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIDVAIADDQLDRVIEAITKAANTGKIGDGKIFVVNLEQAIRIRTGETDTDAI
3LF0 Chain:B ((3-114))
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQ-GHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
General information:
TITO was launched using:
RESULT:
Template:
3LF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58729 for 732 contacts (-80.2/contact) +
2D Compatibility (PS) -12395 + (NN) -2459 + (LL) 64
1D Compatibility (HY) -13200 + (ID) 3200
Total energy: -89919.0 ( -122.84 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_3LF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LF0-query.scw
PDB file :
Tito_Scwrl_3LF0.pdb
: