Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFAKGILAALALAAAVGQASATELEHWPAPAARQLNALIEANANKGAYAVFDMDNTSYRYDLEESLLPYLEMKGVLTRDRLDPSLKLIPFKDQAGHKESLFSYYYRLCE---IDDMVCYPWVAQVFSGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRW---KRPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKAKYMEQINGMIKQHSAAQAKAGLPVTADRNWVIVTPEQIQ |
| 1F5S Chain:A ((2-211)) | ---------------------------------------------------------------------------------------------EKKKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGL-------DYAFANRLIVKDG------------------------KLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDG-ANDISMFKKA----GLKIAFCAKPILKEKADICIEKRDLREILKYIK---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87706 for 1768 contacts (-49.6/contact) +
2D Compatibility (PS) -22299 + (NN) -9956 + (LL) 10148
1D Compatibility (HY) -1200 + (ID) 1450
Total energy: -112463.0 ( -63.61 by residue)
QMean score : 0.397
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