Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MRMRFSGISGCLSAAVLALGVGGAPVVQADALGDSLEQAHIRKATFAAPAWEGYT-NA-DGSGLYWDLLKQVYAPYGLDVKFINMPWNRANK-LMTAGSMVDGVPGEIPGVEGKLYAQLPI-DI-EYHGVMHAAKTPFSGRASLTGKRVGWRHSYNLIPAEQRDFTLVECVRPERCTEQVQNGE-LDFFLDEPDELEKQRSEAHLPADA------YPIAQLPPGKESF----MTFADSASGRLLREVYDARVRQMAASGELRALYQRWNSEVPG-AVQALSAQ------- |
| 4L4W Chain:A ((1-267)) | GHMGPNAVELTTDQAWCLADVLGAGSYPWVLA--ITPPYSDHSQRSAFLAAQSAELTRMGVVNSAGAVDPRVAQWITTVCRATQWLDLRFVLLRGMVARRS------EETVVALRNAQLVTFTAMDIGHQHALVPVLTAGLSGRK----------------PARFDDFALP-AAAGARADEQIRNGAPLAEVLEFLGVPPSARPLVESVFDGRRTYVEIVAGEHRDGHRVTTEVGVSIIDTPHGRILVHPTKAF------DGEWISTFTPGSADAIAMAVERLTASLPSGSWF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68785 for 1673 contacts (-41.1/contact) +
2D Compatibility (PS) -24235 + (NN) 2006 + (LL) 2272
1D Compatibility (HY) -2000 + (ID) 2250
Total energy: -92992.0 ( -55.58 by residue)
QMean score : 0.127
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