Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYRPARVTSTSRFLNPYVVCFIVVAGVVILAVTIALLVYFLAFDQKSYFYRSSFQLLNVEYNSQLNSPATQEYRTLSGRIESLITKTFKESNLRNQFIRAHVAKLRQDGSGVRADVVMKFQFTRNNNGASMKSRIESVLRQMLNNSGNLEINPSTEITSLTDQAAANWLINECGAGPDLITLSEQRILGGTEAEEGSWPWQVSLRLN-----NAHHCGGSLINNMWILTAAHCFRSNSNPRDWIATSGISTT----FPKLRMRVRNILIHNNYKSAT--HENDIALVRLENS----VTFTKDIHSVCLPAATQNIPPGSTAYVTGWGAQEYAG-HTVPELRQGQVRIISNDVCNAPHSYNGAILSGMLCAGVPQGGVDACQGDSGGPLVQEDSRRLWFIVGIVSWGDQCGLPDKPGVYTRVTAYLDWIRQQTGI |
3MHW Chain:U ((1-246)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSAD-LAHHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSL-QGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHTK- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MHW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -154209 for 1984 contacts (-77.7/contact) +
2D Compatibility (PS) -24830 + (NN) -14241 + (LL) 14204
1D Compatibility (HY) -15600 + (ID) 4200
Total energy: -198876.0 ( -100.24 by residue)
QMean score : 0.242
|
|
|