Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRLSWGYREHNGPIHWKEFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIK-YDPS--SAKIISNSGHSFNVDFDDTENKSVLRGGPLTGSYRLRQVHLHWGSAD-DHGSEHIVDGVSYAAELHVVHWNSDKYPSFVEAAHEPDGLAVLGVFLQIGEP-NSQLQKITDTLDSIKEKGKQTRFTNFDLLSLLPPSW-DYWTYPGSLTVPPLLESVTWIVLKQPINISSQQLAKFRSLLCTAEGEAAAFLVSNHRPPQPLKGRKVRASFH |
| 4LU3 Chain:A ((21-279)) | ----HWTYEGPHGQDHWPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPHGYDQPGTEPLDLHNNGHTVQLSLPST---LYL--GGLPRKYVAAQLHLHWGQKGSPGGSEHQINSEATFAELHIVHYDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHKDQKTSVPPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGTLFSTEEEPSKLLVQNYRALQPLNQRMVFASFI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103136 for 2043 contacts (-50.5/contact) +
2D Compatibility (PS) -27157 + (NN) -15659 + (LL) 472
1D Compatibility (HY) -20800 + (ID) 5000
Total energy: -171280.0 ( -83.84 by residue)
QMean score : 0.512
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