Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPGIPH-------FGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEKKMIKGTADFFAVQYYTTRLIKYQENKK-GELGILQDAEIEFFP----DPSWK--NVDWIYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQSDP----APLDDTQRWEYFRQTFQELFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRNNGLEAHL |
| 4JHO Chain:A ((37-498)) | -AFPEGFVFGTAASAYQVEGMAKQGGRGPSIWDAFIEKPG-TIPNNATADVTVDEYHRYKEDVNIMKNMGFDAYRFSISWSRIFPNGT-GMVNQEGVDYYNRLIDYMVKKGIKPYANLYHYDLPLALHEQYLGWLSPNIVEAFADYADFCFQTFGDRVKDWFTFNEPRCVAALGYDNGFHAPGRCSGCDAGGNSTTEPYLAAHHLILSHAAAVKRYREKYQLYQKGRIGILLDFVWYEPFS-DSNADRAAAQRARDFHLGWFLDPII-HGRYPYSMLEIVK----------DRMPTFSDEESRMVKDSIDYVGINHYTSFYMKDPGPWNLTPTSYQDDWHVGFAYERNGVPIGAQANSYWLYIVPWGINKAVTYVKETYGNPTMILSENGMDQPGNVSITQGVHDTVRIRYYRNYITELKKAID-DGAKVIGYFAWSLLDNFEWRLGYTSRFGIVYVDYK--TLKRYPKDSAFWFKNMLS-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250543 for 4005 contacts (-62.6/contact) +
2D Compatibility (PS) -47017 + (NN) -12988 + (LL) 908
1D Compatibility (HY) -41200 + (ID) 9350
Total energy: -360190.0 ( -89.94 by residue)
QMean score : 0.559
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