Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDELAPCPVGTTAWPALIQ--------LISKTPCMPQAASNTSLGLGDLR-VPSSMLYWLFLPSSLLAAATLAVSPLLLVTILRN-QRLRQEPHYLLPANILLSDLAYILLH-----MLISSSSLGGWELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALI-----WLVACCFPTFLIW-------LSKWQDAQLEEQGASYILPPSMGTQP---------------GCGLLVIVTYTS-ILCVLFL----------------CTALIANCFWR--IYAEAKTSGIWGQGYSRA----RGTLL------IHSVLIT---LYVSTGVVFSLDMVLTR-----YHHIDSGTHTWLLAANSEVLMMLPRAMLTYLYLLRYR---QLLGMVRGHLPSRRHQAIFTIS-- |
| 3ACP Chain:A ((1-417)) | MTKTITVAHIQYDFKAVLEENDENDDEFYINVDKNLNEIKEHKIVVLGNSRGVDAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE-NGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDE--------VSQFCYVSDDESNGEVLEVGKNN-----FCALYNLSNP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ACP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -395820 for 2635 contacts (-150.2/contact) +
2D Compatibility (PS) -35667 + (NN) 3333 + (LL) 1324
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -442930.0 ( -168.09 by residue)
QMean score : 0.165
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