Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQPSPPPTELVPSERAVVLLSCALSALGSGLLVATHALWPDLRSRARRLLLFLS-----LADLLSA--ASYFYGVLQNFAGPSWDCVLQGALSTFAN-------TSSFFWTVAIALYLYLSIVRAARGPRTDRLLWAFHVVSWGVPLVITVAAVALKKIG----YDASDVSVGW--------------CWIDLEAKDHVLWMLLTGKLWEMLAYVLLPLL------YLLVRKHINRAHTALSEYRPILSQEHR--------LLRHSSMADKKLVLI----------------PLIFIGLRVWSTVRF----VLTLCGSPAVQ-----TPVLVVLHGIGNTFQGGANCIMFVLC-------------------TRAVRTRLFSLCCCCCSSQPPTKSPAGTPKAPAPSKPGE-SQESQGTPGELPST
3LFM Chain:A ((16-489))----PRGSHMTPKDD--EFYQQWQLKYPKLILREASSVSEELHKEVQEAFLTLHKHGCLFRDLVRIQGKDLLTPVSRILIGNPGCTYKYLNTRLFTVPWPVKAEIAAACETFLKLNDYLQIETIQALEELAADEVDIKSRAAYNVTLLNFMDPQKMPYLKEEPYFGMGKMAVSWHHDENLVDRSAVAVYSYSCEGRDPDIWHVGFKISWDIETPGLAIPLHQGDCYFMLDDLNATHQHCVLAGSQPRFSSTHRVAECSTGTLDYILQRCQLALQNVCDDVDNDDVSLKSFEPAVLKQGEEIHNEVEFEWLRQFWFQGNRYRKCTDWWCQPMAQLEALWKKMEGVTNAVLHEVKREVEQRNEILTAILASLTARQNLRREWHARCQSRIARTPADQKPECRPYWEKDDASMPLPFDLTDIVSELRGQ


General information:
TITO was launched using:
RESULT:

Template: 3LFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171725 for 2259 contacts (-76.0/contact) +
2D Compatibility (PS) -34630 + (NN) -14037 + (LL) 496
1D Compatibility (HY) -2800 + (ID) 2300
Total energy: -224996.0 ( -99.60 by residue)
QMean score : 0.151

(partial model without unconserved sides chains):
PDB file : Tito_3LFM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LFM-query.scw
PDB file : Tito_Scwrl_3LFM.pdb: