Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKLNSTFVTEFLFEGFSSFRRQHKLVFFVVFLTLYLLTLS------G-NVIIMTIIRLDHHLHTPMYFFLCMLSISETCYTVAIIPHMLS--GLLNPHQPIATQSCATQLFFYLTFGINNCFLLTVMGYDRYVAICNPLRYSVIMGKRACIQLASGSLGIGLGMAIVQVTSVFGLPFCDAFVI-SHFFC---------DVRHLLKLACTDTTVNEIINFVVSVC-VLVLPMGLVFISYVLIISTILKIASAEGQKKAFATCASHLTVVIIHYGCASIIYLKPKSQSSLGQDRLISVTYTHHSPTEPCCVQPEEQGGQRCSAQSRGAKNSVSLMKR-GCEGFSFAF-INMY------------ |
| 4Q6T Chain:A ((4-340)) | APFVLA-YTDGQVEASYSNLQAFHRNLSAVGLGSTYGLTVTGKLRQDGMNETTQNIIRFAKSQSLPLYPTVSDYNEDIGAFDPAISHSILNDRALSAGTVKQLVKLAKEGGFAGINLDFEKVEPRNRAAFCAFVKTLGNALHA--SNKKLIISIPPKLSDTEPEYLQGYDYKALGAA-VDYFQVMTYDQVGPGWSSGGFHNEAWPGPESGFDWQQALLSYAVSRVPASKVLAGLPTYGQDYSIGNRVHWSAYQEIIAEH-------RAAIHRDAASATPYATWGPVKSFVDG----VEWTPERAQP--VLWYDD---------AASIKTKTALVTRLGLGGTSVWAMGYENAGFWAALQSGLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q6T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -327975 for 2540 contacts (-129.1/contact) +
2D Compatibility (PS) -29730 + (NN) 19354 + (LL) 1824
1D Compatibility (HY) 6800 + (ID) 2050
Total energy: -331777.0 ( -130.62 by residue)
QMean score : 0.118
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