Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MNISDVISFDILVSAMKTGNQSFGTDFLLVGLF---QYGWINSLLFVVIA------TLFTVALTGNI-----MLIHLIRL------------NTRLHTPMYFLLSQLSIVDLMYISTTVPKMA--------VSFLSQSKT----IRFLGCEIQTYVFLAL---------GGTEALLLGFMSYDRYVAICHPL------HYPMLMSKKICCLMVACAWASGSI----NAFIHTLYVF--QLPFCRSRLINHFFCEVPA---LLSLVCQDTSQYEYTVLLSGLIILLLPFLA-ILASYARVLIVVFQMSSGKGQAKAVSTCSSHLIVASLFYAT----------TLFTYTRPH-----SLRSPSRDKAVAVFYTIVTP-LLNPFIYSLRNKEVTGAVRRLLGYWICCRKYDFRSLY-------- |
| 4XGC Chain:D ((5-457)) | DRELVSIRRFLKERLQRDYTTLRGYAKERSNVRLLLQRTAEMGESNSLLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVALKSITVQMQLENAADGKVFGSFAENLAFLLQCLKSKSVIFILEEFDLFCAHHNQTLLYNLFDVSQSAQAPICVLGVTCRLDVIELLEKRVKSRFSHRQVFLFPSLRRFEDYVDLCRDLLSLPTGNSLLLAAEKIYNLQ---NIQSGALYFSRNHFDPGEYGFSPRLRDAWNKQICKVLATQQARSTLQALHDFDISEAYLKNFLFRLVAHLRPQSPHITAEKMAAVGSQFEGDDKIELLCGLSVLELCLIIAIKHHSQIYDRDSFNFEIIYARFSKFAKVSTTMQAVERSIVLKAFEHLRIAELIMPLTKVQKEFEMHKLALTYSQIHHCMQRYQALPTEVAQWAQSS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272671 for 2174 contacts (-125.4/contact) +
2D Compatibility (PS) -33528 + (NN) -2225 + (LL) 392
1D Compatibility (HY) -12000 + (ID) 3200
Total energy: -323232.0 ( -148.68 by residue)
QMean score : 0.127
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