Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MLGLNGT---PFQP-ATLQLTGIPGIQ-TGLTWVAL----I-FCILYMISIVGNLSILTLV--FWEPALHQPMY-YFLSMLALNDLGVSFSTLPTVISTFCFNYNHVAFNACLVQMFFIHTFSFMESGILLAMSLDR-FVAICYPLRYVTVLTHNRILAM-GLGIL-TKSFTTLFPFPFVVKRLPFC-KGNVLHHSYCLHPDLMKVA-CGDIHVNNIYGLLVIIFTYGMDS--------TFILLSYALILRAMLVIISQEQ-------------RLKALNTCMSHICAVLAFYV-----------PIIAVSMI---------HRFWKSAPPVVHVMMSNVYLFVPPMLNPIIYSVKTKEIRKGILKFFHKSQA |
| 4PEV Chain:A ((52-421)) | PISVLVLFDVGGRGDLSFNDMAALGADRAAEELGVDVVFQTPQSLAVMESVLDAASRSGEYDLIVLVGFLWQEPLEKVAPRYPEQKYALIDAATRERYDN--VASYLFREQEVASLVGIIAADIANNISKATGEEAKAGAVAGMDIPPLWRFHIGYLYGVQYYNQAMGTDVEMVWTYTGRFDDPTLGKTTAEQMLQQGVRVFYGV-AGLTHVGMFNAVKEAAARG--VIAFSIGQDASQEWYDPQTIIISGLKRVDVAVYTAIKDVVEGRFRGGIVSLGLKEGGLGLSDEEIIRYFAEIAAETGQLPEGLTPEKVVEIVMSQREKWISNDGWRLVEELKQKIISGEIKFVTPQ-DHDTYDSIIEELKAGNLEAALE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270079 for 2314 contacts (-116.7/contact) +
2D Compatibility (PS) -30238 + (NN) 1935 + (LL) 1024
1D Compatibility (HY) 19200 + (ID) 1050
Total energy: -279208.0 ( -120.66 by residue)
QMean score : 0.106
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