Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MSISNITVYMPSV-LTLVGIPGLES--VQCWIGIPFCAIYLIAMIGNSLLLSIIKSERSLHEPLYIFLG-MLGATDIALASSIMPKMLGIFWFNVPEIYFDSCLLQMWFIHTLQGIE-SGILVAMALDRYVAICY--PLRHANIFTHQLVI------------QIGTMVVLRAAILVAP--CLVLIKCR---FQFYHTTVISHSYCE-HMAIVKLAAANVQVNKIY-----GLFVAFTV------AGFDLTFITLSYIQIFI-TVFRLPQKEARFKAFNTCIAHICVFLQFYLLAFFS------------FFTHRFGSHISPYIHILF---SSIY-LLVPPFLN---PL---------------VYGAKTTQIRIHVV-------KMFCS |
| 4Q9T Chain:A ((12-446)) | TKILTETEKYSVTKLSTDLSFLPFEGLVDTALQKALVNDLDHIYIWNYNSIQKDTPICKISLHSSPPICLFTSSINGICIINKKNSQFLYFEDISTINNLAHVLDLKLKDNENITSTINCEPSGIIIATSLGRVLFITIKDSTGKPKLELKQQLIKPQNSFFFRNLDSSKEIISLKKGPIVGKGERLLYITTRGGSLQIWQLSINSKSFKRLEINIYEHVLDSLQDLYPFAHGTLAFLDSHPIYSDTSSAHLTLASISNGNEIYYLMITVILDEKTNSFQIFSI----------YKLNTYFTKSTVDLNHKPQLFIPNALDSIVSPTLSVYVLFNNAVVMTQISSKLDSSFPLRRKWEDIIRFNKDVEIIGSGYSTDSIYVICKDMGVLKIASH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -369792 for 2188 contacts (-169.0/contact) +
2D Compatibility (PS) -31810 + (NN) 10927 + (LL) 1328
1D Compatibility (HY) -15200 + (ID) 3000
Total energy: -407547.0 ( -186.26 by residue)
QMean score : 0.136
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