Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MNHMSASLKISNSSKFQ--VSEFILLGFPGIH-SWQHWLSLP------LALLYLSALAANTLI---LIIIWQNPSLQQPMYIFLGILCMVDMGLATTIIPKILA---IFWFD-----AKVISLPECFAQIYAIH---FFVGMESGILLCMAFDRYVAICHPLRYPSIVTSSLILKATLFMVLRNGLFVTPVPVLAAQRDYCSKNEIEHCLCSNLGVTSLACDDRRPNSICQLVLAWLGMGSDLSLIILSYILILYSVLRLNSAEAAAKALSTCSSHLTLI-LFFYTIVVVISVTHLTEMKATLIPVLL--NVLHNIIPPS--------LNPTVYALQTK---------ELRAAFQK---VLFALTKEIRS-------------- |
| 3THI Chain:A ((1-362)) | ITLKVAIYPYVPDPARFQAAVLDQWQRQEPGVKLEFTDWDSYSADPPDDLDVFVLDSIFLSHFVDAGYLLPFGSQDIDQAEDVLPFALQGAKRNGEVYGLPQILCTNLLFYRKGDLKIGQVDNIYELYKKIGTSHSEQIPPPQNKGLLINMA-------------GGTTKASMYLEALIDVTGQYTEY-DLLPPLDPLNDKVIRGLRLLINMAGEKPSQYVPEDGDAY----VRASWFAQGSGRAFIGYSE-----SMMRMGDYAEQVRFKPISSSAGQDIPLFYSDVVSVNSKTAHPELAKKLANVMASADTVEQALRPQADGQYPQYLLPARHQVYEALMQDYPIYSELAQIVNKPSNRVFRLGPEVRTWLKDAKQVLPEALG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3THI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -353178 for 2437 contacts (-144.9/contact) +
2D Compatibility (PS) -31586 + (NN) -6669 + (LL) 2512
1D Compatibility (HY) -8800 + (ID) 2950
Total energy: -400671.0 ( -164.41 by residue)
QMean score : 0.215
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