Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDGVNDSSLQGFVLMGISDHPQLEMIFFIAILFSYLLTLLGNSTIILLSRLEARLHTPMYFFL-SNLSSLDLAFATSSVPQMLINLWGPGKTISYGGCITQLYVFLWLGATECILLVVMAFDRYVAVCRPLRYTAIMNPQLCWLLAVIACLGGLGNSVIQSTFTLQLPLCGHRRVEGFLCEVPAMIKLACGDTSLNQAVLNGVCTFFTAVPLSIIVISYCLIAQAVLKIRSAEG--RRKAFNTCLSHLLVVFLFYGSASYGYLLPAKNSKQDQGKFISLFYSLVTPMVNPLIYTLRNMEVKGALRRLLGKGREVG |
3WI3 Chain:A ((8-275)) | ----------------YSDPKEYIESKYYDALFS--------------------IHTPLAYFVKSNLVRLKNTCRTKY---------GSDS-------------------------------------YKIAYQAMLQK---FLLSIVQFKDRHDNRLLLEPFSS--PIADEKRKN-------CLTKFVIQDENKNSSTIADLCVVLKSREIKLQILLLLEIIGLNDLDWNFRDFDYCEQLDLYLDRACILDILLSSET-GTIQEHKKNILDKSKEASLVGFINYVLIPYF-----NKKVPHAVEFIIQKLKGPS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WI3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181119 for 1593 contacts (-113.7/contact) +
2D Compatibility (PS) -21796 + (NN) -6733 + (LL) 9116
1D Compatibility (HY) -13200 + (ID) 2000
Total energy: -215732.0 ( -135.42 by residue)
QMean score : 0.362
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