Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MQPESGANGTVIAEFILLG--LLEAPGLQPVVFVLFL----FAYLVTVRGNLSILAAVLVEPKLHTPMYFFL-GNLSVLDVGCISVTVPSMLSRLLSR----KRAVPCGACLTQLFFFHLFVG--VDCFLLTAMAYDRFLAICRPLTYSTRMSQTVQRMLVAASWACAFTNALT-HTVAMSTLNFCGPNVINHFYCDLPQLFQ--LSCSSTQLNELLL-----FAVGFIMAGTPMALIVISYIHVAAAVLRIRS---VEGRKKAFSTCGS-------HLTVVAIFYGSGIFNYMRLGSTKLSDKDKAVGIFNTVINPML--------NPIIYSFRNPDVQSAIWRMLTGRRSLA |
| 3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERGYYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKKLRDPANKAVAYSIIASTLAIMEY---EEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEKAGDTLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVGLPQIRAALLKGKNHYALAIIKKKYSGVMRLIGELEVALWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274483 for 2356 contacts (-116.5/contact) +
2D Compatibility (PS) -31709 + (NN) -5634 + (LL) 380
1D Compatibility (HY) -13200 + (ID) 2200
Total energy: -326846.0 ( -138.73 by residue)
QMean score : 0.268
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