Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MEEENATLLTEFVL----TGFLYQPQWKIPLFLAFLVIYLITIMGNLGLIAVIWKDPHLHIPMYLLL--GNLAFVDAWISSTV----TPKMLNNFLAKSKMISLSECKIQFFSFAISVTTECFL-LATMAYDRYVAICKPLLYPAIMTN-------------GLCIRLLILSYVG---GILHALIHEGFLFRLTFCNSNIVHHIYC--DTIPLSKISCTDSSINFLMVFIFSGSIQVFSIVTILVSYTFVLFAI-LKKKSDKGVRKAFSTC----GAHLFSVSLYYGPLL-------FIYVGPASPQADDQDMVEPLFYTVIIPLLNPIIYSLRNKQVTVSFTKMLKKHVKVSY---- |
| 4L8T Chain:A ((64-447)) | EYLGMLQYKREDEAKLIQNLILDLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSTINGIKQVVKEHLEDFEMLSFWLSNTCHFLNCLKQYSGEEEFMKHNSPQQNKNCLNNFDLSEYRQILSDVAIRIYHQFIIIMEKNIQPIIVPGMLEYESLQGYTMTSVLQQLSYFYTTMCQNGLDPELVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQNSLAKETLEPLSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFEKRVTPSFVRKVQALLNSREDSSQLMLDT--KYLFQVTFPFTPSPHALEMIQ-IPSSFKLGFLNRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -263572 for 2184 contacts (-120.7/contact) +
2D Compatibility (PS) -30626 + (NN) -862 + (LL) 616
1D Compatibility (HY) -14400 + (ID) 2050
Total energy: -310894.0 ( -142.35 by residue)
QMean score : 0.123
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