Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------MAEENHTMKNEFILTGF--TDHPELKTLLFVVFFAI-------------YLITVVGNISLVALIFTHRRLHTPMYIFLGNLALVDSCCACAITPKMLENFFSENKRISLYECAVQ------FYFLCTVETADCFLLAAMAYDRYVAICNPLQYHIMMSKKLCIQMTTGAFIAGNLHSMIHVGLVFRLVFCGSNHINHFYCDILP---LYRLSCVDP---YINELVLFIFSGSVQVFTIGSVLISYLYILL-------TIFKMKSK----------EGRAKAFSTCASHFLSVSLFYGSLFFMYVRPNLLEEGDKDIPAAILFTIVVPL---LNPFIYSLRNR-EVISVLRKILMKK---------------------------------- |
| 4PG7 Chain:A ((20-446)) | HMKKLNIALLGLGTVGSGVVKIIEENRQQIQDTLNKDIVIKHILVRDKSKKRPLNISQYHLTEDVNEILNDDSLDIIVEVMGGIEP-TVDWLRTALKNKKHVITANKDLL------AVHLKLLEDLAEENGVALKFEASVAGGPNNISKFMGILNGTSNFILSKMTKEQ-----TTFEEALDEAKRLGFAEADPTDDVEGVDAARKVVITSYLSFNQVIKLNDVKRRGISGVTLTDINVADQLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAAVEDEYNAIYVIGDAVGDTMFYGKGAGSLATGSAVVSDLLNVALFFEST--LPPHFELKTDKTREMEKSNFFVVVNHVKGSIENFENELKAILPFHRSLRVANYDNQSYAAVIVGLESSPEELITKHGYEVDKVYPVEGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PG7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274833 for 1969 contacts (-139.6/contact) +
2D Compatibility (PS) -31382 + (NN) -5754 + (LL) 1352
1D Compatibility (HY) -6000 + (ID) 2500
Total energy: -319117.0 ( -162.07 by residue)
QMean score : 0.213
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