Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MTLRNSSSVTEFILVGLSEQPELQLPLFLLFLG-----IYVFTVVGNLGLITLIGINPSLHTPMYFFLFN------LSFIDLCYSCVFTPKMLNDFVSESII--SYVGCMTQLFFFCFFVNS-------ECYVLVSMAYDRYVAICNPLLYMVTMSPRVCFLLMFGSYV-----VGFAGAMAHTGSMLRLTFCDSNVIDHYLCDVLPLLQLSCTSTHVSELVFFIVVGVITMLSSISIVI--SYALILSNILCIPSAEGRSKAFSTWGSHII---AVALFFGSGTFTYLTTSFPGSMNHGRFASVFYTNVVPM-LNPSIYSLRNKDDKLALGKTLKRVLF- |
| 3C9H Chain:A ((16-354)) | PALAQVAVFPALSGQTLVVYSSLDEPLATPMIEGFQKANPDIAVHYEDMLTGEIYDRIVKETDAGKKTADFAFSSAMDLQVKLSNDGYAQRSDLAMSARWPAWANWRNTAYALTFEPAVFVYHKPSFTTEKPPATRAEFVDYLERHAKEVHGRIATYDIERGVGFLFMSRDQEQFGDIWSVIKAMGAAGV--KVYSTSSAILERVSDGRFVLGY---------NILGSYAADWASRHPDVGIVLPKDYTVVMSRIGLVPEAAANPELGRRYLEFFMSKEGQTIMARQLQIPAVSPEVAGENTANTMQAIHGAQLRPVPVSPGLMVYLDQVKRSRLIERWNEALRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -391707 for 2472 contacts (-158.5/contact) +
2D Compatibility (PS) -31145 + (NN) -9195 + (LL) 872
1D Compatibility (HY) -2400 + (ID) 1700
Total energy: -435275.0 ( -176.08 by residue)
QMean score : 0.252
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