Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAAKNSSVTEFILEGLTHQPGLRIPLFFLFLGFYTVTVVGNLGLITLIGLNSHLHTPMYFFLFNLSLIDFCFSTTITPKMLMSFVSRKNIISFTGCMTQLFFFCFFVVSESFILSAMAYDRYVAICNPLLYTVTMSCQVCLLLLLGAYGMGFAGAMAHTGSIMNLTFCADNLVNHFMCDILPLLELSCNSSYMNELVVFIVVAVD---VGMPIVTVFISYALILSSILHNSSTEGRSKAFSTCSSHIIVVSLFFGSGAFMYLKPLSILPLEQGKVSSLFYTIIVPVLNPLIYSLRNKDVKVALRRTLGRKIFS |
4CRU Chain:B ((4-273)) | -MLEREKIYQWINE--LSSPETRENALLELSK-----------------KRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPET--RSAFLAAHIPLFLYPFLHTVSKT---RPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMES-----GSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLP------DQLKDTTFAQVLKD---DTTTKRWLAQLVKNLQE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268905 for 2130 contacts (-126.2/contact) +
2D Compatibility (PS) -26826 + (NN) 147 + (LL) 4024
1D Compatibility (HY) -3600 + (ID) 1950
Total energy: -297110.0 ( -139.49 by residue)
QMean score : 0.199
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