Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MLSAGLGLL---------------MLVAVVEFLIGLIGNGSLVVWSFREWIRKFN--WSSYNLIILGLAGCRFLLQW----LIILDLSLFPLFQSSRWLRYLSIFWVLVSQASLWFATFLSVFYCKKIT------TFDRPAYLWLKQRAYNLSLWCLLGYFI-----INLLLTVQIGLTFYHPPQGNSSIRYPFESW-QYLYAFQLNSGSYLPLVVFLVSSGMLIVSLYTHHKKMKVHSAGRRDVRAKAHITALKSLGCFLLLHLVYIMASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLILIMGIPRVKQTCQKILWKTVCARRCWGP------------------ |
| 1U19 Chain:A ((4-349)) | MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYY-----TPHEETNNESFVIYMFVVHF----IIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIA-FLICWLPYAGVAFYIFTHQGSDFG-PIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTL--CCGKNPLGDDEASTTVSKTETSQVAPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222987 for 2153 contacts (-103.6/contact) +
2D Compatibility (PS) -29068 + (NN) -4727 + (LL) -248
1D Compatibility (HY) -7200 + (ID) 1200
Total energy: -265430.0 ( -123.28 by residue)
QMean score : 0.318
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