Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNIKTISVKDNNVRLDRYIRRIFPNLKQSVIEKSLRRGLIKVNDCKAKSSDRVNSGQIITIKYLDYIENANSDCKHNEKLVELLRSNILYEDEYILAINKPAGVIVQ--GGIKVKISISDLLDQVREGETFK---IVHRLDRDTSGAI-IFARNANVARYLMEEFKGRRVKKTYLALTSGI-PSKNRGVIDYPLVKKYVSGQE-KVVIDKNS-PQDATTRFSI-IAKFKLNKPLVQRPIIQVADTQLY-EHCNLSL-------SRVCHLSSLSSCYSSALLCHLSAPILVS-SKTDHKQAHYT-TFS-------IKKLDS-SIMCRNDTRSVAYLKLQPITGRTHQLRTHLAYINCPILGDGKYGGKKAFVDGIASKIHLHSYSLSLKLPNNKKITITAPLPEHIKKSIEALHTPF |
| 1PRZ Chain:A ((75-326)) | -----------------------------------------------------------------------------ARFEPQDIPLDIVYEDEDIIVINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTG-LMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAG--GTVDEPISRHPTKRTHMA----VHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDEVDWL--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PRZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31392 for 1474 contacts (-21.3/contact) +
2D Compatibility (PS) -21265 + (NN) 5709 + (LL) 9980
1D Compatibility (HY) 3200 + (ID) 1500
Total energy: -35268.0 ( -23.93 by residue)
QMean score : 0.199
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