Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDALEITQKLISYPTITPK----------ECGIFEYIKSLFP-A----FKTLECEK-NGVKNLFLYRIFNPLKKHAEKEHAKEKHVKENVKPLHFCFAGHIDVVPPGNNWQS--DPFKPIIKEGFLYGRGAQDMKGGVGAFLSASLNFNPKT--PFLLSILLTSDEEGPGIFGTRLMLEKLKEKDLLPHMAIVAEPTCEKVLGDSIKIGRRGSINGKLILK--GVQGHVAYPQ-KCQNPIDTLASVLPLISGVHLDN-------------------------------GDEC------------------FDPSKLVITNLHAG----LGANNVTPGSVEIAFNARHSLKTTQESLKEYLEKVLKDL---PYTLELE--S-SSSPFITASHSK-LTSVLQENILKTCHTTPLLNTKGGTSD-ARFFSA----H-GIEVVEFGAINDRIHAVDERVSLKELELLEKVFLGVLEGLSEK |
| 3PFE Chain:A ((18-471)) | EEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIPGQ--------------------IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYPRCILIIEACEESGS-YDLPFYIELLKERIGKPSLVICLDSGAGNYEQLWMTTSLRGNLVGKLTVELINEGVHSGSASGIVADSFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADGFPAIAD-AGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNPPYNAKVDFKIQNGGSKGWNAPLLSDWLAKAASEASMTYYDKPAAYMGEGGTIPFMSMLGEQFPKAQFMITGVLGPHS-NAHGPNEFLHLDMVKKLTSCVSYVLYSFSQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128255 for 2948 contacts (-43.5/contact) +
2D Compatibility (PS) -38819 + (NN) -15173 + (LL) 1516
1D Compatibility (HY) -8000 + (ID) 3400
Total energy: -192131.0 ( -65.17 by residue)
QMean score : 0.452
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