Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKNYSYKNIQAIDFTQLND-EEKLLVLEFRNHPNTALWMYSA-NISLKTHLQFIEDLKNSPSHRYFLFK-EESVYLGVGSITKINFFHKHGYLGIYKNPFLK--NKGGTILKALERIAFEEFQLNSLHLEVMENNFKAIAFYEKNHYELEGRLKGFISKDKEFIDVLLYYKDKKGYNDQSPLKL
2ZW5 Chain:A ((13-181))
--------RTARLELTPLDPAADARHLHHAYGDEEVMRWWTRPACADPAETERYLTSCAAAPGARLWTIRAPDGTVPGMAGLLGG---TDVPGLTWLLRRDSWGHGYATEAAAAVVGHALEDGGLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPGPHEMVVLGKARAEEPLTTLAVI
General information:
TITO was launched using:
RESULT:
Template:
2ZW5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61387 for 1243 contacts (-49.4/contact) +
2D Compatibility (PS) -17235 + (NN) -1979 + (LL) 660
1D Compatibility (HY) -400 + (ID) 800
Total energy: -81141.0 ( -65.28 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_2ZW5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZW5-query.scw
PDB file :
Tito_Scwrl_2ZW5.pdb
: