Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFQPLL---DAYTDSTRLDETDYKPPLNIALANWWPLDKRESKGFRRFILYFILSQRYTITLHQNPNEPSDLVFGSPIGSARKILSYQNTKRVFYTGENEVPNFNLFDYAIGFDELDFRDRYLRMPLYYASLHYKAESVNDTTAPYKLKDNSLYALKKPSHHFKENHPNLCAVVNDESDPLKRGFASFVASNPNAPIRNAFYDALNSIEPVTGGGSVKNTLGYNVKNKSEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNPKSFVNVCDFKNFDEAIDYVRYLHTHPNAYLDMLYENPLNTLDGKAYFYQNLSFKKILDFFKTILENDTIYHDNPFIFYRDLNEPLVAIDDLRVNYDDLRVNYDDLRVNYDDLRVNYDDLRVNYDDLRVNYDDLRVNYDRLLQNASPLLELSQNTTFKIYRKAYQKSLPLLRTIRRWVKK
4BVA Chain:A ((24-334))KRAPAFLSAEEVQDHLR-SSSLLIPPLEAALANFSKGPDGG----------VMQPVRTVVPVAKHRGFLGVMPAYSAAED-------ALTTKLVTFYESHQASVLLFDP---------------------------------------SNGSLLAVMDGNVITAKRTAAVSAIATKLLKPPGSDVLCILGAGVQAYSHYEIFTEQFSFKEVRMWNR-------TRENAEKFASTVQGDVRVCSS-----VQEAVTGADVIITVTMATEPILFGEWVKPGAHINAVG--------------ASRPD--------------------------------------------------WRELDDELMRQAVLYVD--------------------SREAALKESGDVLLSGADIFAELGEVISGAKPA-HCEKTTVFKSLGMAVEDLVAAKLVYDSWSSG


General information:
TITO was launched using:
RESULT:

Template: 4BVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 20152 for 2703 contacts (7.5/contact) +
2D Compatibility (PS) -31341 + (NN) -3169 + (LL) 10448
1D Compatibility (HY) -7200 + (ID) 2450
Total energy: -13560.0 ( -5.02 by residue)
QMean score : 0.153

(partial model without unconserved sides chains):
PDB file : Tito_4BVA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BVA-query.scw
PDB file : Tito_Scwrl_4BVA.pdb: